Statistical methods and design in plant breeding and genomics

Dr Ian Mackay

Statistical Geneticist, National Institute of Agricultural Botany, Cambridge, UK 

Notes

Slides

Introduction to Plant breeding. Population Genetics & linkage disequilibrium

Quantitative Genetics & Plant breeding

Mapping in experimental pops

LD mapping

Marker assisted & Genomic selection

IBD inference in genome association studies

Professor Elizabeth Thompson

Professor of Statistics and of Biostatistics, Adjunct Professor of Genome Sciences, University of Washington, Seattle, WA, USA

Notes/Slides

Armidale Animal Breeding Summer Course Home

Armidale Animal Breeding Summer Course 2010   Materials

Application of evolutionary algorithms to solve complex problems in quantitative genetics

and bioinformatics: Brian Kinghorn, Cedric Gondro

Bayesian methods in genome association studies: Dorian Garrick,  Rohan Fernando

Armidale Animal Breeding Summer Course 2009   Materials

Quantitative Genetic Theory and Analysis- Selection Theory:    Bruce Walsh

Quantitative Genetic Models for social interaction and inherited variability: Piter Bijma

Armidale Animal Breeding Summer Course 2008   Materials 

Genomic Selection:       Ben Hayes

Armidale Animal Breeding Summer Course 2007   Materials

Generalized Linear Mixed Models:        Steve Kachman

Armidale Animal Breeding Summer Course 2006    Materials

Gene Expression:          Toni Reverter

Breeding Program Design:         Graser, James, Van der Werf

Armidale Animal Breeding Summer Course 2005 Materials

Breeding Objectives: Gibson, Van der Werf, Kinghorn

Scientific Writing:          David Lindsay

ASReml:           Arthur Gilmour

Armidale Animal Breeding Summer Course 2004 Materials

Bayesian for Beginner               Kerrie Mengersen

Bayesian Models for QTL analysis        Michel Perez-Enciso

Bioinformatics   John McEwan

Armidale Animal Breeding Summer Course 2003    Materials

Scientific Writing:  David Lindsay

Linear Models for animal breeding:   Julius van der Werf, Mike Goddard

QTL detection models: Julius van der Werf, Ben Hayes

Armidale Animal Breeding Summer Course Home

Contact                     Julius van der Werf 

                                    Animal Genetics, UNE

                                    phone: 02 6773 2092; 

                                    fax 02 6773 3955

jvanderw (at) une.edu.au